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Pull requests: single-cell-data/TileDB-SOMA

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Pull requests list

[python] Make region_key a categorical when exporting to SpatialData backport release-1.15
#3588 opened Jan 17, 2025 by jp-dark Loading…
1
[python] Change from_visium to create obs presence matrix by default
#3586 opened Jan 17, 2025 by jp-dark Loading…
1
[python/cpp] Add C++ SOMACoordinateSpace and use it to push Scene metadata down to C++
#3580 opened Jan 16, 2025 by jp-dark Loading…
1
[python] Add hypothesis tests
#3560 opened Jan 14, 2025 by bkmartinjr • Draft
1
[c++] Integrate SOMAColumn: Update domain accessors inside SOMAArray, part 2
#3407 opened Dec 8, 2024 by XanthosXanthopoulos • Draft
1
[c++] Integrate SOMAColumn: Arrow adapter methods, part 1
#3405 opened Dec 6, 2024 by XanthosXanthopoulos Loading…
1
24
[python] TileDBConfig type alias, misc. type annotations
#3317 opened Nov 8, 2024 by ryan-williams Loading…
1
[python] Geometry DataFrame
#3297 opened Nov 6, 2024 by XanthosXanthopoulos Loading…
5
[c++] Hide internal dimensions
#3266 opened Oct 31, 2024 by XanthosXanthopoulos Loading…
9
[python] Remove the no-longer-needed wrapper layers [WIP]
#3209 opened Oct 20, 2024 by johnkerl • Draft
1
[c++] Geometry Dataframe [draft]
#3201 opened Oct 18, 2024 by XanthosXanthopoulos • Draft
1
[r] Query conditions for timestamps [WIP]
#3163 opened Oct 11, 2024 by johnkerl • Draft
[r] Remove last private$.tiledb_array and self$object from R classes [WIP] blocked
#3129 opened Oct 4, 2024 by johnkerl • Draft
1
[r] [WIP] Add support for reading v5 assays from an axis query r-api
#3008 opened Sep 17, 2024 by mojaveazure Loading…
9
[c++] Reduce deprecation-warning lines in CI build logs neaten
#2941 opened Aug 29, 2024 by johnkerl • Draft
1
[c++] Test core PR 5260 [WIP] [skip ci]
#2940 opened Aug 28, 2024 by johnkerl • Draft
[c++] Fix typo in test/unit_soma_dense_ndarray.cc [WIP]
#2912 opened Aug 17, 2024 by johnkerl • Draft
[python] Full Windows pre-push CI matrix
#1962 opened Dec 6, 2023 by johnkerl • Draft
@teo-tsirpanis
2
[c++/python] Add SOMAArray::stats to get query stats
#1927 opened Nov 20, 2023 by nguyenv Loading…
10
[r] Implement as generics for SOMASparseNDArrayReader
#1458 opened Jun 7, 2023 by pablo-gar Loading…
20
[r] [RFC] Add SOMASparseNDArray$read_spam_matrix() r-api
#1367 opened May 11, 2023 by mojaveazure Loading…
6
[r] [WIP] Port to_seurat() to SOMAExperiment r-api
#1261 opened Apr 18, 2023 by mojaveazure • Draft
21
[python] Set log level depending on in-notebook or not, and use stdout
#1150 opened Mar 21, 2023 by johnkerl • Draft
3
ProTip! Updated in the last three days: updated:>2025-01-15.