chore: cleanups, update deps, linters

.gitignore

@@ -1,4 +1,5 @@
 .ipynb_checkpoints
+.virtual_documents
 Untitled*.ipynb
 snippets*.ipynb
 **/*~

generate_common.py

@@ -29,6 +29,7 @@
 import warnings
 
 import flammkuchen as fl
+from pandas.core.arrays.masked import to_numpy_dtype_inference
 import tables
 
 import datas.metadata as metadata
@@ -89,7 +90,7 @@ def args2level(args):
 
 
 def create_default_directories():
-    for d in (CACHE_DIR, "docs", "docs/pictures", "docs/speakers"):
+    for d in (CACHE_DIR, "docs", "docs/pictures", "docs/speakers", "build/eqs", "build/ray", "build/website", "build/mako_modules"):
         pathlib.Path(d).mkdir(parents=True, exist_ok=True)
 
 
@@ -147,6 +148,7 @@ def custom_ray_init(args):
             sys.exit(1)
         ray_address = check_address
 
+    tmp_dir = (pathlib.Path.cwd().absolute() / 'build/ray').as_posix()
     if ray_address is not None:
         print(
             "Calling init with cluster at {} dashboard at {}:{}".format(
@@ -162,6 +164,7 @@ def custom_ray_init(args):
             configure_logging=True,
             logging_level=level,
             log_to_driver=True,
+            _temp_dir=tmp_dir,
         )
     else:
         print("Calling init with dashboard at {}:{}".format(dashboard_ip, dashboard_port))
@@ -175,6 +178,7 @@ def custom_ray_init(args):
             configure_logging=True,
             logging_level=level,
             log_to_driver=True,
+            _temp_dir=tmp_dir,
         )