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lict

Systematic bias favours products which are made by the company funding the research. Explanations include the selection of an inappropriate comparator to the product being investigated and publication bias (http://www.ncbi.nlm.nih.gov/pubmed/12775614)

Conflict of interest (or competing interest) statements and medline metadata describe the funding of research and potential sources of bias.

We made a tool for visualising and tracking relationships between papers and their conflict of interests.

Later we might make a simple measure, the conflict of interest index, which describes the proportion of papers for a given drug treatment, that have received industry funding or declare a conflict of interest.

It also might integrate with www.openbnf.org and www.burningyourmoney.org :-)

Conflict of interestz!

http://wiki.nhshackday.com/wiki/Conflict%20of%20interest

Getting Started

Get the code

$ git clone https://github.com/nhshackday/lict
$ cd lict
$ virtualenv $WHERE_YOU_LIKE_TO_KEEP_VIRTUALENVS/lict
$ . $WHERE_YOU_LIKE_TO_KEEP_VIRTUALENVS/lict/bin/activate
$ pip install -r requirements.txt

Get the NLTK dependencies

$ python -m nltk.downloader maxent_treebank_pos_tagger words maxent_ne_chunker

Sort out your data

$ python lict/manage.py syncdb --noinput
$ python lict/manage.py migrate
$ #TODO Integrate instructions from pubmed-download-HOWTO / medline-scrape-HOWTO

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