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Add nf-core mirdeep2 and a test case #1040

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Add nf-core mirdeep2 and a test case

Add nf-core mirdeep2 and a test case #1040

Triggered via pull request September 26, 2024 21:52
@atrigilaatrigila
synchronize #448
atrigila:add_mirdeep_sbwf
Status Failure
Total duration 2m 12s
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ci.yml

on: pull_request
Matrix: Run pipeline with test data
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9 errors and 4 warnings
Run pipeline with test data (4, 23.10.4, docker)
Process completed with exit code 1.
nf - test_skipfastp.test_skipfastp: nf - test_skipfastp#L1
Assertion failed: 10 of 10 assertions failed
nf - test_nextflex.test_nextflex: nf - test_nextflex#L1
Assertion failed: 7 of 7 assertions failed
Run pipeline with test data (3, 23.10.4, docker)
Process completed with exit code 1.
nf - test_mirgenedb.test_mirgenedb: nf - test_mirgenedb#L1
Assertion failed: 10 of 10 assertions failed
Run pipeline with test data (2, 23.10.4, docker)
Process completed with exit code 1.
Run pipeline with test data (1, 23.10.4, docker)
Process completed with exit code 1.
nf - test_contamination_tech_reps.test_contamination_tech_reps: nf - test_contamination_tech_reps#L1
Assertion failed: 8 of 8 assertions failed
nf - test_umi.test_umi: nf - test_umi#L1
Assertion failed: 10 of 10 assertions failed
Run pipeline with test data (4, 23.10.4, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run pipeline with test data (3, 23.10.4, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run pipeline with test data (2, 23.10.4, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run pipeline with test data (1, 23.10.4, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/