nf-core template 3.2.0 #101
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matthdsm
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Jan 31, 2025
modules/nf-core/fastqc/main.nf
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don't think this should be here
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ah crap, stupid template merge :p
mvheetve
reviewed
Jan 31, 2025
conf/modules.config
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| @@ -614,6 +614,7 @@ process { | |||
| withName: 'MULTIQC' { | |||
| ext.args = { params.multiqc_title ? "--title \"$params.multiqc_title\"" : '' } | |||
| publishDir = [ | |||
| path: { "${params.outdir}/multiqc" }, | |||
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why the same line twice?
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Ah good catch :p that snuck in during merge conflict resolving
nvnieuwk
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Jan 31, 2025
mvheetve
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Jan 31, 2025
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PR checklist
nf-core lint).nf-test test).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.nf-core schema docs --format markdown --output docs/parameters.md --forceCHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).