MEDMesh.H

/*---------------------------------------------------------------------------*\
  =========                 |
  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
   \\    /   O peration     |
    \\  /    A nd           | Copyright (C) 2011-2013 OpenFOAM Foundation
     \\/     M anipulation  |
-------------------------------------------------------------------------------
License
    This file is part of OpenFOAM.

    OpenFOAM is free software: you can redistribute it and/or modify it
    under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
    for more details.

    You should have received a copy of the GNU General Public License
    along with OpenFOAM.  If not, see <http://www.gnu.org/licenses/>.

Class
    Foam::MEDMesh

Description

SourceFiles
    MEDMesh.C

\*---------------------------------------------------------------------------*/

#ifndef MEDMesh_H
#define MEDMesh_H

#include "fvMesh.H"
#include "cellSets.H"
#include "faceSets.H"
#include "HashTable.H"
#include "HashSet.H"
#include "PackedBoolList.H"
#include "wordReList.H"
#include "scalarField.H"
#include "cellShapeList.H"
#include "cellList.H"

#include <fstream>
#include <med.h>

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

namespace Foam
{

class fvMesh;
class argList;
class globalIndex;
class MEDStream;

/*---------------------------------------------------------------------------*\
                           Class MEDMesh Declaration
\*---------------------------------------------------------------------------*/

class MEDMesh
{
public:
        class nFacePrimitives
        {
        public:

            label nTris;
            label nQuads;
            label nPolys;

            nFacePrimitives()
            :
                nTris(0),
                nQuads(0),
                nPolys(0)
            {}
        };

private:

    // Private data
        // cell node mapping
        static const label foamToMEDNodeAddr[4][8];
        //- Reference to the OpenFOAM mesh
        const fvMesh& mesh_;

        //- Suppress patches
        const bool noPatches_;

        //- Output selected patches only
        const bool patches_;
        const wordReList patchPatterns_;

        //- Output selected faceZones
        const bool faceZones_;
        const wordReList faceZonePatterns_;

        //- Set binary file output
        const bool binary_;

        //- The MED part id for the first patch
        label patchPartOffset_;

        cellSets meshCellSets_;

        List<faceSets> boundaryFaceSets_;

        wordList allPatchNames_;

        wordHashSet patchNames_;

        HashTable<nFacePrimitives> nPatchPrims_;
        
        int nQuads_;
        int nTris_;
        int nPolys_;

        // faceZone - related variables
        List<faceSets> faceZoneFaceSets_;

        wordHashSet faceZoneNames_;

        HashTable<nFacePrimitives> nFaceZonePrims_;

        //- Per boundary face whether to include or not
        PackedBoolList boundaryFaceToBeIncluded_;


        // Parallel merged points

            //- Global numbering for merged points
            autoPtr<globalIndex> globalPointsPtr_;

            //- From mesh point to global merged point
            labelList pointToGlobal_;

            //- Local points that are unique
            labelList uniquePointMap_;



    // Private Member Functions

        //- Disallow default bitwise copy construct
        MEDMesh(const MEDMesh&);

        //- Disallow default bitwise assignment
        void operator=(const MEDMesh&);

        void writePoints
        (
            const scalarField& pointsComponent,
            MEDStream& MEDGeometryFile
        ) const;

        cellShapeList map
        (
            const cellShapeList& cellShapes,
            const labelList& prims,
            const labelList& pointToGlobal
        ) const;

        cellShapeList map
        (
            const cellShapeList& cellShapes,
            const labelList& hexes,
            const labelList& wedges,
            const labelList& pointToGlobal
        ) const;

        void writePrims
        (
            const med_geometry_type key,
            const cellShapeList& cellShapes,
            const label *mapping,
            const char *meshname,
            const int medfileid
        ) const;

        void writePolysNFaces
        (
            const labelList& polys,
            const cellList& cellFaces,
            const char* meshname,
            const int medfileid
        ) const;

        void writePolysNPointsPerFace
        (
            const labelList& polys,
            const cellList& cellFaces,
            const faceList& faces,
            const char* meshname,
            const int medfileid
        ) const;

        void writePolysPoints
        (
            const labelList& polys,
            const cellList& cellFaces,
            const faceList& faces,
            const labelList& faceOwner,
            const char* meshname,
            const int medfileid
        ) const;

        void writeAllPolyhedrons
        (
            const labelList& pointToGlobal,
            const char* meshname,
            const int medfileid
        ) const;

        void writeAllPrims
        (
            const med_geometry_type key,
            const label nPrims,
            const cellShapeList& cellShapes,
            const label *mapping,
            const char *meshname,
            const int medfileid
        ) const;

        void writeFacePrims
        (
            const med_geometry_type key,
            const faceList& patchFaces,
            const char* meshname,
            const int medfileid
        ) const;

        void writeAllFacePrims
        (
            const med_geometry_type key,
            const labelList& prims,
            const label nPrims,
            const faceList& patchFaces,
            const char* meshname,
            const int medfileid
        ) const;

        void writeAllPolygons
        (
            const labelList& prims,
            const label nPrims,
            const faceList& patchFaces,
            const char* meshname,
            const int medfileid
        ) const;

        void writePolygons
        (
            const faceList& patchFaces,
            const char* meshname,
            const int medfileid
        ) const;

        void writeAllPoints
        (
            const pointField& uniquePoints,
            const label nPoints,
            const double scale,
            const char *meshname,
            const int medfileid
        ) const;

        void writeFamilies
        (
         const med_geometry_type key,
         const int nelems,
         const med_int *families,
         const char* meshname,
         const int medfileid
         )const;

public:

    // Constructors

        //- Construct from fvMesh
        MEDMesh
        (
            const fvMesh& mesh,
            const bool noPatches,
            const bool patches,
            const wordReList& patchPatterns,
            const bool faceZones,
            const wordReList& faceZonePatterns,
            const bool binary
        );


    //- Destructor
    ~MEDMesh();


    // Member Functions

        // Access

            const fvMesh& mesh() const
            {
                return mesh_;
            }

            const cellSets& meshCellSets() const
            {
                return meshCellSets_;
            }

            const List<faceSets>& boundaryFaceSets() const
            {
                return boundaryFaceSets_;
            }

            const wordList& allPatchNames() const
            {
                return allPatchNames_;
            }

            const wordHashSet& patchNames() const
            {
                return patchNames_;
            }

            const HashTable<nFacePrimitives>& nPatchPrims() const
            {
                return nPatchPrims_;
            }

            const List<faceSets>& faceZoneFaceSets() const
            {
                return faceZoneFaceSets_;
            }

            const wordHashSet& faceZoneNames() const
            {
                return faceZoneNames_;
            }

            const HashTable<nFacePrimitives>& nFaceZonePrims() const
            {
                return nFaceZonePrims_;
            }

            //- The MED part id for the first patch
            label patchPartOffset() const
            {
                return patchPartOffset_;
            }


        // Parallel point merging

            //- Global numbering for merged points
            const globalIndex& globalPoints() const
            {
                return globalPointsPtr_();
            }

            //- From mesh point to global merged point
            const labelList& pointToGlobal() const
            {
                return pointToGlobal_;
            }

            //- Local points that are unique
            const labelList& uniquePointMap() const
            {
                return uniquePointMap_;
            }




    // Other

        //- Update for new mesh
        void correct();

        //- When exporting faceZones, check if a given face has to be included
        //  or not (i.e. faces on processor boundaries)
        bool faceToBeIncluded(const label faceI) const;

        //- Helper to cause barrier. Necessary on Quadrics.
        static void barrier();


    // I-O

        void write
        (
            const label timeIndex,
            const bool meshMoving,
            const double scale,
            const char * meshname,
            const int medfileid
        ) const;

};


// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

} // End namespace Foam

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

#endif

// ************************************************************************* //