[pre-commit.ci] pre-commit autoupdate #331
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name: Test | |
on: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main] | |
schedule: | |
- cron: "0 5 1,15 * *" | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -e {0} # -e to fail on error | |
strategy: | |
fail-fast: false | |
matrix: | |
include: | |
- os: ubuntu-latest | |
python: "3.10" | |
r: release | |
- os: ubuntu-latest | |
python: "3.12" | |
r: release | |
- os: ubuntu-latest | |
python: "3.12" | |
r: release | |
pip-flags: "--pre" | |
env: | |
OS: ${{ matrix.os }} | |
PYTHON: ${{ matrix.python }} | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_KEEP_PKG_SOURCE: yes | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python }} | |
cache: "pip" | |
cache-dependency-path: "**/pyproject.toml" | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.r }} | |
use-public-rspm: true | |
- name: Install test dependencies | |
run: | | |
python -m pip install --upgrade pip wheel | |
- name: Install dependencies | |
run: | | |
pip install ".[dev,test,copykat]" | |
- name: Install R dependencies | |
run: | | |
install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/stable/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch)) | |
# TODO: use copykat version from february, latest version seens to have a bug... | |
pak::pkg_install(c('stringr', 'navinlabcode/copykat@674e331cf12ce14b62eaf6459f7c84a82fc4c775')) | |
shell: Rscript {0} | |
- name: Test | |
env: | |
MPLBACKEND: agg | |
PLATFORM: ${{ matrix.os }} | |
DISPLAY: :42 | |
run: | | |
coverage run -m pytest -v --color=yes | |
- name: Report coverage | |
run: | | |
coverage report | |
- name: Upload coverage | |
uses: codecov/codecov-action@v3 |