Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add MRI postprocessing of SPM12 outputs as following Huang2013 #31

Merged
merged 4 commits into from
Dec 16, 2024
Merged

Add MRI postprocessing of SPM12 outputs as following Huang2013 #31

merged 4 commits into from
Dec 16, 2024

Conversation

harmening
Copy link
Contributor

@harmening harmening commented Aug 30, 2024 •
edited
Loading

Add postprocessing of SPM12 segmentation masks following Huang2013.

Starting from SPM12 segmentation, simply do

import cedalion.geometry.segmentation as cgeoseg 
mask_files = cgeoseg.segmentation_postprocessing(seg_datadir)

and mask_files contain the postprocessed segmentation_masks following Huang2013 and Harmening2022.

@harmening harmening requested review from emiddell, avolu and shakiba93 and removed request for avolu August 30, 2024 00:51
@harmening harmening added the enhancement New feature or request label Dec 10, 2024
@harmening harmening changed the base branch from main to dev December 16, 2024 14:39
@emiddell emiddell merged commit eeb5bf8 into dev Dec 16, 2024
8 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@emiddell emiddell emiddell approved these changes

@shakiba93 shakiba93 shakiba93 approved these changes

Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
3 participants
@harmening @emiddell @shakiba93