Test ACI #21
Workflow file for this run
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| name: Test ACI | |
| on: [pull_request, workflow_dispatch] | |
| run-name: Test ACI | |
| jobs: | |
| test: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| run: pip install pandas matplotlib pysam | |
| - name: Run ACI | |
| run: ./aci -b test/test.bam -d test/test.bed -o test | |
| - name: Run ACI with single flag | |
| run: ./aci -b test/test.bam -d test/test.bed -o test1 -s | |
| - name: Run ACI version | |
| run: ./aci -v | |
| - name: Run ACI help | |
| run: ./aci -h | |
| - name : Final tree | |
| run: tree . |