This tool was designed to add a 'TaxID' column in a binning file in biobox format.
The main input of this tool is a binning file which can be generated by the cami amber utility script 'convert_fasta_bins_to_biobox_format.py'.
The second input of this tool can be either a contig2taxid file which can be generated by 'kraken2' or a binid2taxid file which looks as followed:
BinID TaxID
test1 11056
test2 444944
ABC 888
....
It is important to state the column where either the BinID or the ContigID is stored together with the column where the TaxID is stored. The first column is 1 and the second 2 and so on!