Initial FSL/Freesurfer images #27
Workflow file for this run
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--- | |
name: main | |
on: | |
push: | |
pull_request: | |
workflow_dispatch: | |
# schedule: | |
# - cron: "0 6 * * *" | |
defaults: | |
run: | |
shell: bash | |
jobs: | |
containers: | |
runs-on: ubuntu-22.04 | |
strategy: | |
matrix: | |
package: ["FSL", "Freesurfer"] | |
steps: | |
- name: checkout | |
uses: actions/checkout@v4 | |
- name: free disk space | |
run: | | |
set -euxo pipefail | |
df -h | |
sudo rm -rf /usr/share/dotnet | |
sudo rm -rf /usr/local/lib/android | |
sudo rm -rf /usr/local/share/boost | |
sudo rm -rf /opt/ghc | |
sudo rm -rf "$AGENT_TOOLSDIRECTORY" | |
sudo docker image prune --all --force | |
df -h | |
- name: build image | |
run: | | |
set -euxo pipefail | |
cd "software/${{ matrix.package }}" | |
# img="ghcr.io/smi/fsl:$(grep FSL_VERSION= Dockerfile | cut -d'"' -f2)" | |
# docker build . --tag "$img" | |
# echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u $ --password-stdin | |
# docker push "$img" |