Depending on the Modis Reprojection Tool is not ideal, Issues encountered with a login and correct files required for the HDF subset.
GDAL should be able to make the reprojection and formatting of raw MODIS data:
###Dependancies - numpy - gdal ( work in progress )
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Open the script
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Pick a particular month and year and modify the values in
aMonth
aYear
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Run the script with
>>> python modis_gdal.py