Code

New Motion#442

Code

Merged

cncastillo merged 100 commits intomasterJuliaHealth/KomaMRI.jl:masterfrom new-motionJuliaHealth/KomaMRI.jl:new-motionCopy head branch name to clipboardSep 19, 2024

+1,726-1,266

Commits

Commits on Jul 11, 2024

• Initial commit

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• Delete Static

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• Merge branch 'master' into new-motion

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Commits on Aug 1, 2024

• Apply suggested change by @rkierulf

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• Merge branch 'master' into new-motion

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• Solve bug

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• Enable all testsitems

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Commits on Aug 8, 2024

• Suggested changes

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Commits on Aug 9, 2024

• Solve bug

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• Solve bug

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Commits on Aug 12, 2024

• Export AbstractMotionList

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• Remove periodic motions from docs

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• Update contracting_ring.phantom example

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Commits on Aug 13, 2024

• Recover tmp variable for now

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• Solve docs bug

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• Update docs to pass CI

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Commits on Aug 14, 2024

• Docstrings to pass CI

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Commits on Aug 19, 2024

• Test get_spin_coords in core

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• Continue testing

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• Correct bug

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• Add SimpleMotion test

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• Solve bug

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• Try again...

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• Again...

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• Check if only fails with oneAPI

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• Try now

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• Aux comments

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• Try with simple motion

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• comments

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• Recover to initial state

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• Merge branch 'master' into new-motion

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• Comments

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• More comments

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• Try again

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Commits on Aug 20, 2024

• Merge branch 'master' into new-motion

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• Merge branch 'master' into new-motion

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Commits on Aug 23, 2024

• Big change

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• Merge branch 'new-motion' of https://github.com/JuliaHealth/KomaMRI.jl into new-motion

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Commits on Aug 24, 2024

• Try again to test cpu multi-thread error

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• Docstrings to pass CI

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• Solve multi-thread bug

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• Solve bug, now it is

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• Merge branch 'master' into new-motion

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• Solve docs CI?

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Commits on Aug 26, 2024

• Compare MotionLists' lengths

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• Solve bugs

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• Auxiliary length method for SpinRanges

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Commits on Aug 27, 2024

• Solve bugs for flow

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• Merge branch 'master' into new-motion

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Commits on Aug 28, 2024

• Update docstrings

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Commits on Aug 29, 2024

• Fix some docstrings

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• Remove unnecessary docstring

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• Try to include docstring of Translate function

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• It worked, so add the rest of the functions

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• Not export reset_magnetization!

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• Fix typo in docstring

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• Try to separate tests for core and motion (see Oceananigans.jl)

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• Try to fix error on runtests.yml

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• Try to fix buildkite tests

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• Change test group title for buildkite

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• Try to interpolate env variable with $$

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• Try with only one $

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• Define env for each buildkite step

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• Motion and NoMotion tests separated for buildkite

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Commits on Aug 30, 2024

• Only test get_spin_coords for ArbitraryAction in gpu

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• Fix test to use Float32

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• Disable benchmarks temporarily

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• Only test ArbitraryMotion for oneAPI

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• New example phantoms

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• Test ArbitraryMotion with all vendors again

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• Trying to find out where the error produces for oneAPI

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• Keep trying

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Commits on Sep 3, 2024

• Merge branch new-motion-debug into new-motion

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• Leave core tests as they were before debugging

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• _ = sum(t)

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• New function _unit_time

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• Merge branch 'master' into new-motion

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Commits on Sep 12, 2024

• Squashed commit of the following:

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• Uncomment informative messages

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Commits on Sep 13, 2024

• Change compat from julia 1.9 to 1.10

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• Requested changes

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Commits on Sep 15, 2024

• consts in upper case

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• Fix and rename aux motion functions

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• Add functor to Motion. MotionList cannot have a functor

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• Fix tests

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• cis -> _cis

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• Formatting and renaming

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• Back to (cos.(ϕ) .+ im .* sin.(ϕ))

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• Add KomaMRIBase into sort_motions! call

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Commits on Sep 16, 2024

• Add issue to Interpolations.jl

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Commits on Sep 17, 2024

• outflow_spin_reset! inside all methods

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• Workgroup size back to 512

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• Remove *, since it produces errors in CPU

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Commits on Sep 18, 2024

• Suggested changes for flow functions

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• Suggested changes about plot_phantom_map

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• Remove unnecessary T declaration

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Commits on Sep 19, 2024

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• Add tests to new plot_phantom_map method

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• Solve bug with TimeRange in the KomaMRIPlots tests

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• Suggested changes

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