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In conda installation, UFCG requires ufcg -t download to finish installation.
However, current error message
"Failed to detect environment path. --ppxcfg, --seqpath, and --modelpath options should be specified."
"ERROR! Block profile model directory is incomplete."
is difficult for users to figure out needs of ufcg -t download
I suggest to add messages such as these
If this is your first time using UFCG, use "ufcg -t download config
If you haven't downloaded model, use "ufcg -t download minimum" or "ufcg -t download full"
The text was updated successfully, but these errors were encountered:
Please run ufcg download -t minimum if you encounter the following warning and error from profile module after the first installation.
Failed to detect environment path. --ppxcfg, --seqpath, and --modelpath options should be specified.
ERROR! AUGUSTUS-PPX config file is absent or improperly formatted.
These messages may appear again after updating the conda package into the newest version, even if you've been using the previous version of the pipeline. In such cases, running ufcg download -t minimum will resolve the issue as well, however, will occupy unnecessary disk space by downloading another set of databases.
This will be handled by the next update, along with adding better description to the warning messages.
endixk
changed the title
Need better warnings in first execution
How to resolve warning Failed to detect environment path. and/or error AUGUSTUS-PPX config file is absent or improperly formatted.May 17, 2023
endixk
changed the title
How to resolve warning Failed to detect environment path. and/or error AUGUSTUS-PPX config file is absent or improperly formatted.
How to resolve warning "Failed to detect environment path" and error "AUGUSTUS-PPX config file is absent or improperly formatted."
May 17, 2023
In conda installation, UFCG requires
ufcg -t download
to finish installation.However, current error message
"Failed to detect environment path. --ppxcfg, --seqpath, and --modelpath options should be specified."
"ERROR! Block profile model directory is incomplete."
is difficult for users to figure out needs of
ufcg -t download
I suggest to add messages such as these
If this is your first time using UFCG, use "ufcg -t download config
If you haven't downloaded model, use "ufcg -t download minimum" or "ufcg -t download full"
The text was updated successfully, but these errors were encountered: