From c89935a3470129fc71f80251b8db253692286f3f Mon Sep 17 00:00:00 2001
From: Pierre-Morisse <pierre.morisse2@univ-rouen.fr>
Date: Fri, 22 Feb 2019 13:47:21 +0100
Subject: [PATCH] Fix bug with headers containing spaces

---
 src/CONSENT.cpp | 1 +
 1 file changed, 1 insertion(+)

diff --git a/src/CONSENT.cpp b/src/CONSENT.cpp
index 63388e4..a006f42 100644
--- a/src/CONSENT.cpp
+++ b/src/CONSENT.cpp
@@ -577,6 +577,7 @@ void indexReads(std::map<std::string, std::vector<bool>>& index, std::string rea
 	getline(f, header);
 	while (header.length() > 0) {
 		header.erase(0, 1);
+		header = splitString(header, " ")[0];
 		getline(f, sequence);
 		std::transform(sequence.begin(), sequence.end(), sequence.begin(), ::toupper);
 		index[header] = fullstr2num(sequence);