DESCRIPTION

Package: canceR
Type: Package
Title: A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC
Version: 1.37.1
Date: 2024-02-28
Author: Karim Mezhoud.
    Nuclear Safety & Security Department.
    Nuclear Science Center of Tunisia.
Maintainer: Karim Mezhoud <kmezhoud@gmail.com>
Description: The package is user friendly interface based on the cgdsr and
    other modeling packages to explore, compare, and analyse all
    available Cancer Data (Clinical data, Gene Mutation, Gene Methylation, Gene
    Expression, Protein Phosphorylation, Copy Number Alteration) hosted by the
    Computational Biology Center at Memorial-Sloan-Kettering Cancer Center
    (MSKCC).
License: GPL-2
LazyLoad: yes
Depends:
    R (>= 4.3),
    tcltk,
    cBioPortalData
Imports:
    GSEABase,
    tkrplot,
    geNetClassifier,
    RUnit,
    Formula,
    rpart,
    survival,
    Biobase,
    phenoTest,
    circlize,
    plyr,
    tidyr,
    dplyr,
    graphics,
    stats,
    utils,
    grDevices,
    R.oo,
    R.methodsS3
Suggests:
    testthat (>= 3.1),
    knitr,
    rmarkdown,
    BiocStyle
SystemRequirements: Tktable, BWidget
VignetteBuilder: knitr
BugReports: https://github.com/kmezhoud/canceR/issues
biocViews: GUI, GeneExpression, Clustering, GO, GeneSetEnrichment, KEGG, MultipleComparison
RoxygenNote: 7.3.1
Encoding: UTF-8