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null_model()
for zero-inflated models.
#891
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This code might work: data(fish, package = "insight")
m1 <- glmmTMB::glmmTMB(
count ~ child + camper + (1 | persons),
ziformula = ~ child + camper + (1 | persons),
data = fish,
family = poisson()
)
args <- lapply(insight::get_call(m1), deparse)[-1]
formula_args <- endsWith(names(args), "formula")
resp <- insight::find_response(m1)
args[formula_args] <- lapply(names(args[formula_args]), function(f_names) {
f <- args[[f_names]]
re_string <- sapply(insight:::.findbars(stats::as.formula(f)), insight::safe_deparse)
if (!insight::is_empty_object(re_string)) {
if (startsWith(f_names, "zi")) {
stats::reformulate(paste0("(", re_string, ")"), response = NULL)
} else {
stats::reformulate(paste0("(", re_string, ")"), response = resp)
}
} else {
stats::as.formula(f)
}
})
args[!formula_args] <- lapply(args[!formula_args], str2lang)
args
#> $formula
#> count ~ (1 | persons)
#> <environment: 0x0000022c396853f8>
#>
#> $data
#> fish
#>
#> $family
#> poisson()
#>
#> $ziformula
#> ~(1 | persons)
#> <environment: 0x0000022c3965f588>
#>
#> $dispformula
#> ~1
#> <environment: 0x0000022c39118cf8> do.call(glmmTMB::glmmTMB, args)
#> Formula: count ~ (1 | persons)
#> Zero inflation: ~(1 | persons)
#> Data: fish
#> AIC BIC logLik df.resid
#> 1880.6558 1894.7417 -936.3279 246
#> Random-effects (co)variances:
#>
#> Conditional model:
#> Groups Name Std.Dev.
#> persons (Intercept) 0.8114
#>
#> Zero-inflation model:
#> Groups Name Std.Dev.
#> persons (Intercept) 8.98e-05
#>
#> Number of obs: 250 / Conditional model: persons, 4 / Zero-inflation model: persons, 4
#>
#> Fixed Effects:
#>
#> Conditional model:
#> (Intercept)
#> 1.599
#>
#> Zero-inflation model:
#> (Intercept)
#> 0.1763 Created on 2024-06-14 with reprex v2.1.0 |
Lgtm |
strengejacke
added a commit
that referenced
this issue
Jun 14, 2024
* `null_model()` for zero-inflated models. Fixes #891 * also work for no random effects in zi part * fix tests
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Originally posted by @bbolker in #889 (comment)
The text was updated successfully, but these errors were encountered: