.travis.yml

# Config file for automatic testing at travis-ci.org
# Conda testing for Travis CI from https://gist.github.com/dan-blanchard/7045057
language: python

python:
  - 2.7

notifications:
  email: false
  
# Setup Anaconda
before_install:
  - wget http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh
  - chmod +x miniconda.sh
  # Install in batch mode
  - ./miniconda.sh -b  -p $HOME/miniconda
  - export PATH=$HOME/miniconda/bin:$PATH
  - conda update --yes conda

install:
  # pip cannot easily install scipy or matplotlib on the Travis CI server
  - conda install --yes python=$TRAVIS_PYTHON_VERSION scipy matplotlib graphviz
  # Install the cloned dragonn package from source using Anaconda
  - pip install .

# run a simulation from simulations.py
script: python -c 'from simdna.simulations import simulate_single_motif_detection; sequences, labels, embedding_arr = simulate_single_motif_detection("SPI1_disc1", 20, 500, 500, 0.4)'