DESCRIPTION

Package: MetaLonDA
Type: Package
Title: Metagenomics Longitudinal Differential Abundance Method
Version: 1.1.8
Date: 2019-12-17
Author: Ahmed A. Metwally, Yang Dai, Patricia W. Finn, David L. Perkins
Maintainer: Ahmed A. Metwally <ametwall@stanford.edu>
URL: https://github.com/aametwally/MetaLonDA
BugReports: https://github.com/aametwally/MetaLonDA/issues
Description: Identify time intervals of differentially abundant metagenomic features in longitudinal studies (Metwally AA, et al., Microbiome, 2018 <doi:10.1186/s40168-018-0402-y>).
License: MIT + file LICENSE
Depends:
    R(>= 3.5.0)
Imports: 
    gss,
    plyr,
    zoo,
    pracma,
    ggplot2,
    parallel,
    doParallel,
    metagenomeSeq,
    DESeq2,
    edgeR
Suggests:
    knitr,
    rmarkdown
biocViews:
Repository: CRAN
NeedsCompilation: no
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
VignetteBuilder: knitr