diff --git a/Cargo.lock b/Cargo.lock
index bb2d74f28b32..42857f1e18f9 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -4692,7 +4692,7 @@ dependencies = [
 [[package]]
 name = "greptime-proto"
 version = "0.1.0"
-source = "git+https://github.com/GreptimeTeam/greptime-proto.git?rev=e2fd89fce1fe9ea0c36c85bcf447ce4bb4a84af3#e2fd89fce1fe9ea0c36c85bcf447ce4bb4a84af3"
+source = "git+https://github.com/GreptimeTeam/greptime-proto.git?rev=fc09a5696608d2a0aa718cc835d5cb9c4e8e9387#fc09a5696608d2a0aa718cc835d5cb9c4e8e9387"
 dependencies = [
  "prost 0.13.3",
  "serde",
diff --git a/Cargo.toml b/Cargo.toml
index b4543e5e4d66..5b9f893f1980 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -129,7 +129,7 @@ etcd-client = "0.14"
 fst = "0.4.7"
 futures = "0.3"
 futures-util = "0.3"
-greptime-proto = { git = "https://github.com/GreptimeTeam/greptime-proto.git", rev = "e2fd89fce1fe9ea0c36c85bcf447ce4bb4a84af3" }
+greptime-proto = { git = "https://github.com/GreptimeTeam/greptime-proto.git", rev = "fc09a5696608d2a0aa718cc835d5cb9c4e8e9387" }
 hex = "0.4"
 http = "1"
 humantime = "2.1"
diff --git a/src/api/src/v1/column_def.rs b/src/api/src/v1/column_def.rs
index a1d209c0e74f..214418bd44b8 100644
--- a/src/api/src/v1/column_def.rs
+++ b/src/api/src/v1/column_def.rs
@@ -15,10 +15,10 @@
 use std::collections::HashMap;
 
 use datatypes::schema::{
-    ColumnDefaultConstraint, ColumnSchema, FulltextAnalyzer, FulltextOptions, COMMENT_KEY,
-    FULLTEXT_KEY, INVERTED_INDEX_KEY, SKIPPING_INDEX_KEY,
+    ColumnDefaultConstraint, ColumnSchema, FulltextAnalyzer, FulltextOptions, SkippingIndexType,
+    COMMENT_KEY, FULLTEXT_KEY, INVERTED_INDEX_KEY, SKIPPING_INDEX_KEY,
 };
-use greptime_proto::v1::Analyzer;
+use greptime_proto::v1::{Analyzer, SkippingIndexType as PbSkippingIndexType};
 use snafu::ResultExt;
 
 use crate::error::{self, Result};
@@ -121,6 +121,13 @@ pub fn as_fulltext_option(analyzer: Analyzer) -> FulltextAnalyzer {
     }
 }
 
+/// Tries to construct a `SkippingIndexType` from the given skipping index type.
+pub fn as_skipping_index_type(skipping_index_type: PbSkippingIndexType) -> SkippingIndexType {
+    match skipping_index_type {
+        PbSkippingIndexType::BloomFilter => SkippingIndexType::BloomFilter,
+    }
+}
+
 #[cfg(test)]
 mod tests {
 
diff --git a/src/common/grpc-expr/src/alter.rs b/src/common/grpc-expr/src/alter.rs
index 78ceff0d2f35..85f8e51d37fb 100644
--- a/src/common/grpc-expr/src/alter.rs
+++ b/src/common/grpc-expr/src/alter.rs
@@ -15,13 +15,14 @@
 use api::helper::ColumnDataTypeWrapper;
 use api::v1::add_column_location::LocationType;
 use api::v1::alter_table_expr::Kind;
-use api::v1::column_def::as_fulltext_option;
+use api::v1::column_def::{as_fulltext_option, as_skipping_index_type};
 use api::v1::{
     column_def, AddColumnLocation as Location, AlterTableExpr, Analyzer, CreateTableExpr,
     DropColumns, ModifyColumnTypes, RenameTable, SemanticType,
+    SkippingIndexType as PbSkippingIndexType,
 };
 use common_query::AddColumnLocation;
-use datatypes::schema::{ColumnSchema, FulltextOptions, RawSchema};
+use datatypes::schema::{ColumnSchema, FulltextOptions, RawSchema, SkippingIndexOptions};
 use snafu::{ensure, OptionExt, ResultExt};
 use store_api::region_request::{SetRegionOption, UnsetRegionOption};
 use table::metadata::TableId;
@@ -31,7 +32,8 @@ use table::requests::{
 };
 
 use crate::error::{
-    InvalidColumnDefSnafu, InvalidSetFulltextOptionRequestSnafu, InvalidSetTableOptionRequestSnafu,
+    InvalidColumnDefSnafu, InvalidSetFulltextOptionRequestSnafu,
+    InvalidSetSkippingIndexOptionRequestSnafu, InvalidSetTableOptionRequestSnafu,
     InvalidUnsetTableOptionRequestSnafu, MissingAlterIndexOptionSnafu, MissingFieldSnafu,
     MissingTimestampColumnSnafu, Result, UnknownLocationTypeSnafu,
 };
@@ -137,6 +139,18 @@ pub fn alter_expr_to_request(table_id: TableId, expr: AlterTableExpr) -> Result<
                         column_name: i.column_name,
                     },
                 },
+                api::v1::set_index::Options::Skipping(s) => AlterKind::SetIndex {
+                    options: SetIndexOptions::Skipping {
+                        column_name: s.column_name,
+                        options: SkippingIndexOptions {
+                            granularity: s.granularity as u32,
+                            index_type: as_skipping_index_type(
+                                PbSkippingIndexType::try_from(s.skipping_index_type)
+                                    .context(InvalidSetSkippingIndexOptionRequestSnafu)?,
+                            ),
+                        },
+                    },
+                },
             },
             None => return MissingAlterIndexOptionSnafu.fail(),
         },
@@ -152,6 +166,11 @@ pub fn alter_expr_to_request(table_id: TableId, expr: AlterTableExpr) -> Result<
                         column_name: i.column_name,
                     },
                 },
+                api::v1::unset_index::Options::Skipping(s) => AlterKind::UnsetIndex {
+                    options: UnsetIndexOptions::Skipping {
+                        column_name: s.column_name,
+                    },
+                },
             },
             None => return MissingAlterIndexOptionSnafu.fail(),
         },
diff --git a/src/common/grpc-expr/src/error.rs b/src/common/grpc-expr/src/error.rs
index 7eca56bccd41..5092181f7682 100644
--- a/src/common/grpc-expr/src/error.rs
+++ b/src/common/grpc-expr/src/error.rs
@@ -140,6 +140,14 @@ pub enum Error {
         error: prost::UnknownEnumValue,
     },
 
+    #[snafu(display("Invalid set skipping index option request"))]
+    InvalidSetSkippingIndexOptionRequest {
+        #[snafu(implicit)]
+        location: Location,
+        #[snafu(source)]
+        error: prost::UnknownEnumValue,
+    },
+
     #[snafu(display("Missing alter index options"))]
     MissingAlterIndexOption {
         #[snafu(implicit)]
@@ -171,6 +179,7 @@ impl ErrorExt for Error {
             Error::InvalidSetTableOptionRequest { .. }
             | Error::InvalidUnsetTableOptionRequest { .. }
             | Error::InvalidSetFulltextOptionRequest { .. }
+            | Error::InvalidSetSkippingIndexOptionRequest { .. }
             | Error::MissingAlterIndexOption { .. } => StatusCode::InvalidArguments,
         }
     }
diff --git a/src/datatypes/src/schema/column_schema.rs b/src/datatypes/src/schema/column_schema.rs
index c403600ad166..6547886dfbbe 100644
--- a/src/datatypes/src/schema/column_schema.rs
+++ b/src/datatypes/src/schema/column_schema.rs
@@ -380,6 +380,11 @@ impl ColumnSchema {
         );
         Ok(())
     }
+
+    pub fn unset_skipping_options(&mut self) -> Result<()> {
+        self.metadata.remove(SKIPPING_INDEX_KEY);
+        Ok(())
+    }
 }
 
 /// Column extended type set in column schema's metadata.
diff --git a/src/operator/src/expr_helper.rs b/src/operator/src/expr_helper.rs
index bb22ae6fdf29..3c90f4d27571 100644
--- a/src/operator/src/expr_helper.rs
+++ b/src/operator/src/expr_helper.rs
@@ -22,14 +22,15 @@ use api::v1::{
     set_index, unset_index, AddColumn, AddColumns, AlterDatabaseExpr, AlterTableExpr, Analyzer,
     ColumnDataType, ColumnDataTypeExtension, CreateFlowExpr, CreateTableExpr, CreateViewExpr,
     DropColumn, DropColumns, ExpireAfter, ModifyColumnType, ModifyColumnTypes, RenameTable,
-    SemanticType, SetDatabaseOptions, SetFulltext, SetIndex, SetInverted, SetTableOptions,
-    TableName, UnsetDatabaseOptions, UnsetFulltext, UnsetIndex, UnsetInverted, UnsetTableOptions,
+    SemanticType, SetDatabaseOptions, SetFulltext, SetIndex, SetInverted, SetSkipping,
+    SetTableOptions, SkippingIndexType as PbSkippingIndexType, TableName, UnsetDatabaseOptions,
+    UnsetFulltext, UnsetIndex, UnsetInverted, UnsetSkipping, UnsetTableOptions,
 };
 use common_error::ext::BoxedError;
 use common_grpc_expr::util::ColumnExpr;
 use common_time::Timezone;
 use datafusion::sql::planner::object_name_to_table_reference;
-use datatypes::schema::{ColumnSchema, FulltextAnalyzer, Schema, COMMENT_KEY};
+use datatypes::schema::{ColumnSchema, FulltextAnalyzer, Schema, SkippingIndexType, COMMENT_KEY};
 use file_engine::FileOptions;
 use query::sql::{
     check_file_to_table_schema_compatibility, file_column_schemas_to_table,
@@ -587,6 +588,19 @@ pub(crate) fn to_alter_table_expr(
                     column_name: column_name.value,
                 })),
             },
+            sql::statements::alter::SetIndexOperation::Skipping {
+                column_name,
+                options,
+            } => SetIndex {
+                options: Some(set_index::Options::Skipping(SetSkipping {
+                    column_name: column_name.value,
+                    enable: true,
+                    granularity: options.granularity as u64,
+                    skipping_index_type: match options.index_type {
+                        SkippingIndexType::BloomFilter => PbSkippingIndexType::BloomFilter.into(),
+                    },
+                })),
+            },
         }),
         AlterTableOperation::UnsetIndex { options } => AlterTableKind::UnsetIndex(match options {
             sql::statements::alter::UnsetIndexOperation::Fulltext { column_name } => UnsetIndex {
@@ -599,6 +613,11 @@ pub(crate) fn to_alter_table_expr(
                     column_name: column_name.value,
                 })),
             },
+            sql::statements::alter::UnsetIndexOperation::Skipping { column_name } => UnsetIndex {
+                options: Some(unset_index::Options::Skipping(UnsetSkipping {
+                    column_name: column_name.value,
+                })),
+            },
         }),
     };
 
diff --git a/src/sql/src/parsers/alter_parser.rs b/src/sql/src/parsers/alter_parser.rs
index 87636efed6d9..0411292dae13 100644
--- a/src/sql/src/parsers/alter_parser.rs
+++ b/src/sql/src/parsers/alter_parser.rs
@@ -25,7 +25,9 @@ use sqlparser::tokenizer::{Token, TokenWithLocation};
 use crate::error::{self, InvalidColumnOptionSnafu, Result, SetFulltextOptionSnafu};
 use crate::parser::ParserContext;
 use crate::parsers::create_parser::INVERTED;
-use crate::parsers::utils::validate_column_fulltext_create_option;
+use crate::parsers::utils::{
+    validate_column_fulltext_create_option, validate_column_skipping_index_create_option,
+};
 use crate::statements::alter::{
     AddColumn, AlterDatabase, AlterDatabaseOperation, AlterTable, AlterTableOperation,
     KeyValueOption, SetIndexOperation, UnsetIndexOperation,
@@ -241,9 +243,14 @@ impl ParserContext<'_> {
             TokenWithLocation {
                 token: Token::Word(w),
                 ..
-            } if w.keyword == Keyword::FULLTEXT => Ok(AlterTableOperation::UnsetIndex {
-                options: UnsetIndexOperation::Fulltext { column_name },
-            }),
+            } if w.keyword == Keyword::FULLTEXT => {
+                self.parser
+                    .expect_keyword(Keyword::INDEX)
+                    .context(error::SyntaxSnafu)?;
+                Ok(AlterTableOperation::UnsetIndex {
+                    options: UnsetIndexOperation::Fulltext { column_name },
+                })
+            }
 
             TokenWithLocation {
                 token: Token::Word(w),
@@ -256,8 +263,24 @@ impl ParserContext<'_> {
                     options: UnsetIndexOperation::Inverted { column_name },
                 })
             }
+
+            TokenWithLocation {
+                token: Token::Word(w),
+                ..
+            } if w.value.eq_ignore_ascii_case("SKIPPING") => {
+                self.parser
+                    .expect_keyword(Keyword::INDEX)
+                    .context(error::SyntaxSnafu)?;
+                Ok(AlterTableOperation::UnsetIndex {
+                    options: UnsetIndexOperation::Skipping { column_name },
+                })
+            }
             _ => self.expected(
-                format!("{:?} OR INVERTED INDEX", Keyword::FULLTEXT).as_str(),
+                format!(
+                    "{:?} OR INVERTED INDEX OR SKIPPING INDEX",
+                    Keyword::FULLTEXT
+                )
+                .as_str(),
                 self.parser.peek_token(),
             ),
         }
@@ -268,7 +291,12 @@ impl ParserContext<'_> {
             TokenWithLocation {
                 token: Token::Word(w),
                 ..
-            } if w.keyword == Keyword::FULLTEXT => self.parse_alter_column_fulltext(column_name),
+            } if w.keyword == Keyword::FULLTEXT => {
+                self.parser
+                    .expect_keyword(Keyword::INDEX)
+                    .context(error::SyntaxSnafu)?;
+                self.parse_alter_column_fulltext(column_name)
+            }
 
             TokenWithLocation {
                 token: Token::Word(w),
@@ -281,8 +309,18 @@ impl ParserContext<'_> {
                     options: SetIndexOperation::Inverted { column_name },
                 })
             }
+
+            TokenWithLocation {
+                token: Token::Word(w),
+                ..
+            } if w.value.eq_ignore_ascii_case("SKIPPING") => {
+                self.parser
+                    .expect_keyword(Keyword::INDEX)
+                    .context(error::SyntaxSnafu)?;
+                self.parse_alter_column_skipping(column_name)
+            }
             _ => self.expected(
-                format!("{:?} OR INVERTED INDEX", Keyword::FULLTEXT).as_str(),
+                format!("{:?} OR INVERTED OR SKIPPING INDEX", Keyword::FULLTEXT).as_str(),
                 self.parser.peek_token(),
             ),
         }
@@ -319,6 +357,35 @@ impl ParserContext<'_> {
             },
         })
     }
+
+    fn parse_alter_column_skipping(&mut self, column_name: Ident) -> Result<AlterTableOperation> {
+        let options = self
+            .parser
+            .parse_options(Keyword::WITH)
+            .context(error::SyntaxSnafu)?
+            .into_iter()
+            .map(parse_option_string)
+            .collect::<Result<HashMap<String, String>>>()?;
+
+        for key in options.keys() {
+            ensure!(
+                validate_column_skipping_index_create_option(key),
+                InvalidColumnOptionSnafu {
+                    name: column_name.to_string(),
+                    msg: format!("invalid SKIPPING INDEX option: {key}"),
+                }
+            );
+        }
+
+        Ok(AlterTableOperation::SetIndex {
+            options: SetIndexOperation::Skipping {
+                column_name,
+                options: options
+                    .try_into()
+                    .context(error::SetSkippingIndexOptionSnafu)?,
+            },
+        })
+    }
 }
 
 /// Parses a string literal and an optional string literal value.
@@ -891,7 +958,7 @@ mod tests {
 
     #[test]
     fn test_parse_alter_column_fulltext() {
-        let sql = "ALTER TABLE test_table MODIFY COLUMN a SET FULLTEXT WITH(analyzer='English',case_sensitive='false')";
+        let sql = "ALTER TABLE test_table MODIFY COLUMN a SET FULLTEXT INDEX WITH(analyzer='English',case_sensitive='false')";
         let mut result =
             ParserContext::create_with_dialect(sql, &GreptimeDbDialect {}, ParseOptions::default())
                 .unwrap();
@@ -928,7 +995,7 @@ mod tests {
             _ => unreachable!(),
         }
 
-        let sql = "ALTER TABLE test_table MODIFY COLUMN a UNSET FULLTEXT";
+        let sql = "ALTER TABLE test_table MODIFY COLUMN a UNSET FULLTEXT INDEX";
         let mut result =
             ParserContext::create_with_dialect(sql, &GreptimeDbDialect {}, ParseOptions::default())
                 .unwrap();
@@ -955,7 +1022,8 @@ mod tests {
             _ => unreachable!(),
         }
 
-        let invalid_sql = "ALTER TABLE test_table MODIFY COLUMN a SET FULLTEXT WITH('abcd'='true')";
+        let invalid_sql =
+            "ALTER TABLE test_table MODIFY COLUMN a SET FULLTEXT INDEX WITH('abcd'='true')";
         let result = ParserContext::create_with_dialect(
             invalid_sql,
             &GreptimeDbDialect {},
diff --git a/src/sql/src/statements/alter.rs b/src/sql/src/statements/alter.rs
index f807b4f07efa..4f271efc4096 100644
--- a/src/sql/src/statements/alter.rs
+++ b/src/sql/src/statements/alter.rs
@@ -16,7 +16,7 @@ use std::fmt::{Debug, Display};
 
 use api::v1;
 use common_query::AddColumnLocation;
-use datatypes::schema::FulltextOptions;
+use datatypes::schema::{FulltextOptions, SkippingIndexOptions};
 use itertools::Itertools;
 use serde::Serialize;
 use sqlparser::ast::{ColumnDef, DataType, Ident, ObjectName, TableConstraint};
@@ -96,22 +96,28 @@ pub enum AlterTableOperation {
 
 #[derive(Debug, Clone, PartialEq, Eq, Visit, VisitMut, Serialize)]
 pub enum SetIndexOperation {
-    /// `MODIFY COLUMN <column_name> SET FULLTEXT [WITH <options>]`
+    /// `MODIFY COLUMN <column_name> SET FULLTEXT INDEX [WITH <options>]`
     Fulltext {
         column_name: Ident,
         options: FulltextOptions,
     },
     /// `MODIFY COLUMN <column_name> SET INVERTED INDEX`
     Inverted { column_name: Ident },
+    /// `MODIFY COLUMN <column_name> SET SKIPPING INDEX`
+    Skipping {
+        column_name: Ident,
+        options: SkippingIndexOptions,
+    },
 }
 
 #[derive(Debug, Clone, PartialEq, Eq, Visit, VisitMut, Serialize)]
 pub enum UnsetIndexOperation {
-    /// `MODIFY COLUMN <column_name> UNSET FULLTEXT`
+    /// `MODIFY COLUMN <column_name> UNSET FULLTEXT INDEX`
     Fulltext { column_name: Ident },
-
     /// `MODIFY COLUMN <column_name> UNSET INVERTED INDEX`
     Inverted { column_name: Ident },
+    /// `MODIFY COLUMN <column_name> UNSET SKIPPING INDEX`
+    Skipping { column_name: Ident },
 }
 
 #[derive(Debug, Clone, PartialEq, Eq, Visit, VisitMut, Serialize)]
@@ -175,19 +181,28 @@ impl Display for AlterTableOperation {
                     column_name,
                     options,
                 } => {
-                    write!(f, "MODIFY COLUMN {column_name} SET FULLTEXT WITH(analyzer={0}, case_sensitive={1})", options.analyzer, options.case_sensitive)
+                    write!(f, "MODIFY COLUMN {column_name} SET FULLTEXT INDEX WITH(analyzer={0}, case_sensitive={1})", options.analyzer, options.case_sensitive)
                 }
                 SetIndexOperation::Inverted { column_name } => {
                     write!(f, "MODIFY COLUMN {column_name} SET INVERTED INDEX")
                 }
+                SetIndexOperation::Skipping {
+                    column_name,
+                    options,
+                } => {
+                    write!(f, "MODIFY COLUMN {column_name} SET SKIPPING INDEX WITH(granularity={0}, index_type={1})", options.granularity, options.index_type)
+                }
             },
             AlterTableOperation::UnsetIndex { options } => match options {
                 UnsetIndexOperation::Fulltext { column_name } => {
-                    write!(f, "MODIFY COLUMN {column_name} UNSET FULLTEXT")
+                    write!(f, "MODIFY COLUMN {column_name} UNSET FULLTEXT INDEX")
                 }
                 UnsetIndexOperation::Inverted { column_name } => {
                     write!(f, "MODIFY COLUMN {column_name} UNSET INVERTED INDEX")
                 }
+                UnsetIndexOperation::Skipping { column_name } => {
+                    write!(f, "MODIFY COLUMN {column_name} UNSET SKIPPING INDEX")
+                }
             },
         }
     }
@@ -410,7 +425,7 @@ ALTER TABLE monitor RENAME monitor_new"#,
             }
         }
 
-        let sql = "ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT WITH(analyzer='English',case_sensitive='false')";
+        let sql = "ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT INDEX WITH(analyzer='English',case_sensitive='false')";
         let stmts =
             ParserContext::create_with_dialect(sql, &GreptimeDbDialect {}, ParseOptions::default())
                 .unwrap();
@@ -422,7 +437,7 @@ ALTER TABLE monitor RENAME monitor_new"#,
                 let new_sql = format!("\n{}", set);
                 assert_eq!(
                     r#"
-ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT WITH(analyzer=English, case_sensitive=false)"#,
+ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT INDEX WITH(analyzer=English, case_sensitive=false)"#,
                     &new_sql
                 );
             }
@@ -431,7 +446,7 @@ ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT WITH(analyzer=English, case_sen
             }
         }
 
-        let sql = "ALTER TABLE monitor MODIFY COLUMN a UNSET FULLTEXT";
+        let sql = "ALTER TABLE monitor MODIFY COLUMN a UNSET FULLTEXT INDEX";
         let stmts =
             ParserContext::create_with_dialect(sql, &GreptimeDbDialect {}, ParseOptions::default())
                 .unwrap();
@@ -443,7 +458,7 @@ ALTER TABLE monitor MODIFY COLUMN a SET FULLTEXT WITH(analyzer=English, case_sen
                 let new_sql = format!("\n{}", set);
                 assert_eq!(
                     r#"
-ALTER TABLE monitor MODIFY COLUMN a UNSET FULLTEXT"#,
+ALTER TABLE monitor MODIFY COLUMN a UNSET FULLTEXT INDEX"#,
                     &new_sql
                 );
             }
diff --git a/src/store-api/src/metadata.rs b/src/store-api/src/metadata.rs
index b07e1bdb60f7..e776c63bc948 100644
--- a/src/store-api/src/metadata.rs
+++ b/src/store-api/src/metadata.rs
@@ -28,7 +28,7 @@ use common_error::ext::ErrorExt;
 use common_error::status_code::StatusCode;
 use common_macro::stack_trace_debug;
 use datatypes::arrow::datatypes::FieldRef;
-use datatypes::schema::{ColumnSchema, FulltextOptions, Schema, SchemaRef};
+use datatypes::schema::{ColumnSchema, FulltextOptions, Schema, SchemaRef, SkippingIndexOptions};
 use serde::de::Error;
 use serde::{Deserialize, Deserializer, Serialize};
 use snafu::{ensure, Location, OptionExt, ResultExt, Snafu};
@@ -586,6 +586,10 @@ impl RegionMetadataBuilder {
                 ApiSetIndexOptions::Inverted { column_name } => {
                     self.change_column_inverted_index_options(column_name, true)?
                 }
+                ApiSetIndexOptions::Skipping {
+                    column_name,
+                    options,
+                } => self.change_column_skipping_index_options(column_name, Some(options))?,
             },
             AlterKind::UnsetIndex { options } => match options {
                 ApiUnsetIndexOptions::Fulltext { column_name } => {
@@ -594,6 +598,9 @@ impl RegionMetadataBuilder {
                 ApiUnsetIndexOptions::Inverted { column_name } => {
                     self.change_column_inverted_index_options(column_name, false)?
                 }
+                ApiUnsetIndexOptions::Skipping { column_name } => {
+                    self.change_column_skipping_index_options(column_name, None)?
+                }
             },
             AlterKind::SetRegionOptions { options: _ } => {
                 // nothing to be done with RegionMetadata
@@ -764,6 +771,32 @@ impl RegionMetadataBuilder {
         }
         Ok(())
     }
+
+    fn change_column_skipping_index_options(
+        &mut self,
+        column_name: String,
+        options: Option<SkippingIndexOptions>,
+    ) -> Result<()> {
+        for column_meta in self.column_metadatas.iter_mut() {
+            if column_meta.column_schema.name == column_name {
+                if let Some(options) = &options {
+                    column_meta
+                        .column_schema
+                        .set_skipping_options(options)
+                        .context(UnsetSkippingIndexOptionsSnafu {
+                            column_name: column_name.clone(),
+                        })?;
+                } else {
+                    column_meta.column_schema.unset_skipping_options().context(
+                        UnsetSkippingIndexOptionsSnafu {
+                            column_name: column_name.clone(),
+                        },
+                    )?;
+                }
+            }
+        }
+        Ok(())
+    }
 }
 
 /// Fields skipped in serialization.
@@ -919,6 +952,22 @@ pub enum MetadataError {
         #[snafu(implicit)]
         location: Location,
     },
+
+    #[snafu(display("Failed to set skipping index options for column {}", column_name))]
+    SetSkippingIndexOptions {
+        column_name: String,
+        source: datatypes::Error,
+        #[snafu(implicit)]
+        location: Location,
+    },
+
+    #[snafu(display("Failed to unset skipping index options for column {}", column_name))]
+    UnsetSkippingIndexOptions {
+        column_name: String,
+        source: datatypes::Error,
+        #[snafu(implicit)]
+        location: Location,
+    },
 }
 
 impl ErrorExt for MetadataError {
diff --git a/src/store-api/src/region_request.rs b/src/store-api/src/region_request.rs
index bdc78f6f7012..b12159975c81 100644
--- a/src/store-api/src/region_request.rs
+++ b/src/store-api/src/region_request.rs
@@ -17,17 +17,20 @@ use std::fmt::{self, Display};
 
 use api::helper::ColumnDataTypeWrapper;
 use api::v1::add_column_location::LocationType;
-use api::v1::column_def::as_fulltext_option;
+use api::v1::column_def::{as_fulltext_option, as_skipping_index_type};
 use api::v1::region::{
     alter_request, compact_request, region_request, AlterRequest, AlterRequests, CloseRequest,
     CompactRequest, CreateRequest, CreateRequests, DeleteRequests, DropRequest, DropRequests,
     FlushRequest, InsertRequests, OpenRequest, TruncateRequest,
 };
-use api::v1::{self, set_index, Analyzer, Option as PbOption, Rows, SemanticType, WriteHint};
+use api::v1::{
+    self, set_index, Analyzer, Option as PbOption, Rows, SemanticType,
+    SkippingIndexType as PbSkippingIndexType, WriteHint,
+};
 pub use common_base::AffectedRows;
 use common_time::TimeToLive;
-use datatypes::data_type::ConcreteDataType;
-use datatypes::schema::FulltextOptions;
+use datatypes::prelude::ConcreteDataType;
+use datatypes::schema::{FulltextOptions, SkippingIndexOptions};
 use serde::{Deserialize, Serialize};
 use snafu::{ensure, OptionExt, ResultExt};
 use strum::{AsRefStr, IntoStaticStr};
@@ -511,6 +514,10 @@ pub enum ApiSetIndexOptions {
     Inverted {
         column_name: String,
     },
+    Skipping {
+        column_name: String,
+        options: SkippingIndexOptions,
+    },
 }
 
 impl ApiSetIndexOptions {
@@ -518,6 +525,7 @@ impl ApiSetIndexOptions {
         match self {
             ApiSetIndexOptions::Fulltext { column_name, .. } => column_name,
             ApiSetIndexOptions::Inverted { column_name } => column_name,
+            ApiSetIndexOptions::Skipping { column_name, .. } => column_name,
         }
     }
 
@@ -525,6 +533,7 @@ impl ApiSetIndexOptions {
         match self {
             ApiSetIndexOptions::Fulltext { .. } => true,
             ApiSetIndexOptions::Inverted { .. } => false,
+            ApiSetIndexOptions::Skipping { .. } => false,
         }
     }
 }
@@ -533,6 +542,7 @@ impl ApiSetIndexOptions {
 pub enum ApiUnsetIndexOptions {
     Fulltext { column_name: String },
     Inverted { column_name: String },
+    Skipping { column_name: String },
 }
 
 impl ApiUnsetIndexOptions {
@@ -540,6 +550,7 @@ impl ApiUnsetIndexOptions {
         match self {
             ApiUnsetIndexOptions::Fulltext { column_name } => column_name,
             ApiUnsetIndexOptions::Inverted { column_name } => column_name,
+            ApiUnsetIndexOptions::Skipping { column_name } => column_name,
         }
     }
 
@@ -547,6 +558,7 @@ impl ApiUnsetIndexOptions {
         match self {
             ApiUnsetIndexOptions::Fulltext { .. } => true,
             ApiUnsetIndexOptions::Inverted { .. } => false,
+            ApiUnsetIndexOptions::Skipping { .. } => false,
         }
     }
 }
@@ -722,6 +734,18 @@ impl TryFrom<alter_request::Kind> for AlterKind {
                         column_name: i.column_name,
                     },
                 },
+                set_index::Options::Skipping(s) => AlterKind::SetIndex {
+                    options: ApiSetIndexOptions::Skipping {
+                        column_name: s.column_name,
+                        options: SkippingIndexOptions {
+                            index_type: as_skipping_index_type(
+                                PbSkippingIndexType::try_from(s.skipping_index_type)
+                                    .context(DecodeProtoSnafu)?,
+                            ),
+                            granularity: s.granularity as u32,
+                        },
+                    },
+                },
             },
             alter_request::Kind::UnsetIndex(o) => match o.options.unwrap() {
                 v1::unset_index::Options::Fulltext(f) => AlterKind::UnsetIndex {
@@ -734,6 +758,11 @@ impl TryFrom<alter_request::Kind> for AlterKind {
                         column_name: i.column_name,
                     },
                 },
+                v1::unset_index::Options::Skipping(s) => AlterKind::UnsetIndex {
+                    options: ApiUnsetIndexOptions::Skipping {
+                        column_name: s.column_name,
+                    },
+                },
             },
         };
 
diff --git a/src/table/src/error.rs b/src/table/src/error.rs
index 344140680f35..ef08ebc4a115 100644
--- a/src/table/src/error.rs
+++ b/src/table/src/error.rs
@@ -156,6 +156,22 @@ pub enum Error {
         #[snafu(implicit)]
         location: Location,
     },
+
+    #[snafu(display("Failed to set skipping index options for column {}", column_name))]
+    SetSkippingOptions {
+        column_name: String,
+        source: datatypes::Error,
+        #[snafu(implicit)]
+        location: Location,
+    },
+
+    #[snafu(display("Failed to unset skipping index options for column {}", column_name))]
+    UnsetSkippingOptions {
+        column_name: String,
+        source: datatypes::Error,
+        #[snafu(implicit)]
+        location: Location,
+    },
 }
 
 impl ErrorExt for Error {
@@ -179,7 +195,9 @@ impl ErrorExt for Error {
             Error::Unsupported { .. } => StatusCode::Unsupported,
             Error::ParseTableOption { .. } => StatusCode::InvalidArguments,
             Error::MissingTimeIndexColumn { .. } => StatusCode::IllegalState,
-            Error::InvalidTableOptionValue { .. } => StatusCode::InvalidArguments,
+            Error::InvalidTableOptionValue { .. }
+            | Error::SetSkippingOptions { .. }
+            | Error::UnsetSkippingOptions { .. } => StatusCode::InvalidArguments,
         }
     }
 
diff --git a/src/table/src/metadata.rs b/src/table/src/metadata.rs
index c8a65a8407b9..0054afed7d6e 100644
--- a/src/table/src/metadata.rs
+++ b/src/table/src/metadata.rs
@@ -22,6 +22,7 @@ use datafusion_expr::TableProviderFilterPushDown;
 pub use datatypes::error::{Error as ConvertError, Result as ConvertResult};
 use datatypes::schema::{
     ColumnSchema, FulltextOptions, RawSchema, Schema, SchemaBuilder, SchemaRef,
+    SkippingIndexOptions,
 };
 use derive_builder::Builder;
 use serde::{Deserialize, Serialize};
@@ -221,6 +222,14 @@ impl TableMeta {
                 SetIndexOptions::Inverted { column_name } => {
                     self.change_column_modify_inverted_index(table_name, column_name, true)
                 }
+                SetIndexOptions::Skipping {
+                    column_name,
+                    options,
+                } => self.change_column_skipping_index_options(
+                    table_name,
+                    column_name,
+                    Some(options),
+                ),
             },
             AlterKind::UnsetIndex { options } => match options {
                 UnsetIndexOptions::Fulltext { column_name } => {
@@ -229,6 +238,9 @@ impl TableMeta {
                 UnsetIndexOptions::Inverted { column_name } => {
                     self.change_column_modify_inverted_index(table_name, column_name, false)
                 }
+                UnsetIndexOptions::Skipping { column_name } => {
+                    self.change_column_skipping_index_options(table_name, column_name, None)
+                }
             },
         }
     }
@@ -402,6 +414,56 @@ impl TableMeta {
         Ok(meta_builder)
     }
 
+    /// Creates a [TableMetaBuilder] with modified column skipping index options.
+    fn change_column_skipping_index_options(
+        &self,
+        table_name: &str,
+        column_name: &str,
+        options: Option<&SkippingIndexOptions>,
+    ) -> Result<TableMetaBuilder> {
+        let table_schema = &self.schema;
+        let mut meta_builder = self.new_meta_builder();
+
+        let mut columns = Vec::with_capacity(table_schema.column_schemas().len());
+        for column_schema in table_schema.column_schemas() {
+            if column_schema.name == column_name {
+                let mut new_column_schema = column_schema.clone();
+                if let Some(options) = options {
+                    set_column_skipping_index_options(
+                        &mut new_column_schema,
+                        column_name,
+                        options,
+                    )?;
+                } else {
+                    unset_column_skipping_index_options(&mut new_column_schema, column_name)?;
+                }
+                columns.push(new_column_schema);
+            } else {
+                columns.push(column_schema.clone());
+            }
+        }
+
+        let mut builder = SchemaBuilder::try_from_columns(columns)
+            .with_context(|_| error::SchemaBuildSnafu {
+                msg: format!("Failed to convert column schemas into schema for table {table_name}"),
+            })?
+            .version(table_schema.version() + 1);
+
+        for (k, v) in table_schema.metadata().iter() {
+            builder = builder.add_metadata(k, v);
+        }
+
+        let new_schema = builder.build().with_context(|_| error::SchemaBuildSnafu {
+            msg: format!("Failed to convert column schemas into schema for table {table_name}"),
+        })?;
+
+        let _ = meta_builder
+            .schema(Arc::new(new_schema))
+            .primary_key_indices(self.primary_key_indices.clone());
+
+        Ok(meta_builder)
+    }
+
     // TODO(yingwen): Remove this.
     /// Allocate a new column for the table.
     ///
@@ -1131,6 +1193,28 @@ fn unset_column_fulltext_options(
     Ok(())
 }
 
+fn set_column_skipping_index_options(
+    column_schema: &mut ColumnSchema,
+    column_name: &str,
+    options: &SkippingIndexOptions,
+) -> Result<()> {
+    column_schema
+        .set_skipping_options(options)
+        .context(error::SetSkippingOptionsSnafu { column_name })?;
+
+    Ok(())
+}
+
+fn unset_column_skipping_index_options(
+    column_schema: &mut ColumnSchema,
+    column_name: &str,
+) -> Result<()> {
+    column_schema
+        .unset_skipping_options()
+        .context(error::UnsetSkippingOptionsSnafu { column_name })?;
+    Ok(())
+}
+
 #[cfg(test)]
 mod tests {
     use common_error::ext::ErrorExt;
diff --git a/src/table/src/requests.rs b/src/table/src/requests.rs
index fb435e0e672f..4a409d1293a7 100644
--- a/src/table/src/requests.rs
+++ b/src/table/src/requests.rs
@@ -25,7 +25,7 @@ use common_time::range::TimestampRange;
 use common_time::TimeToLive;
 use datatypes::data_type::ConcreteDataType;
 use datatypes::prelude::VectorRef;
-use datatypes::schema::{ColumnSchema, FulltextOptions};
+use datatypes::schema::{ColumnSchema, FulltextOptions, SkippingIndexOptions};
 use greptime_proto::v1::region::compact_request;
 use serde::{Deserialize, Serialize};
 use store_api::metric_engine_consts::{
@@ -239,12 +239,17 @@ pub enum SetIndexOptions {
     Inverted {
         column_name: String,
     },
+    Skipping {
+        column_name: String,
+        options: SkippingIndexOptions,
+    },
 }
 
 #[derive(Debug, Clone, Serialize, Deserialize)]
 pub enum UnsetIndexOptions {
     Fulltext { column_name: String },
     Inverted { column_name: String },
+    Skipping { column_name: String },
 }
 
 #[derive(Debug)]
diff --git a/tests/cases/standalone/common/alter/change_col_fulltext_options.result b/tests/cases/standalone/common/alter/change_col_fulltext_options.result
index 154e1f8914dd..fc0020afa43c 100644
--- a/tests/cases/standalone/common/alter/change_col_fulltext_options.result
+++ b/tests/cases/standalone/common/alter/change_col_fulltext_options.result
@@ -42,7 +42,7 @@ SELECT * FROM test WHERE MATCHES(message, 'hello') ORDER BY message;
 | world hello | 2020-01-02T00:00:01 |
 +-------------+---------------------+
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'true');
 
 Affected Rows: 0
 
@@ -103,7 +103,7 @@ SHOW INDEX FROM test;
 | test  | 1          | TIME INDEX     | 1            | time        | A         |             |          |        | NO   |                            |         |               | YES     |            |
 +-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+----------------------------+---------+---------------+---------+------------+
 
-ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT;
+ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT INDEX;
 
 Affected Rows: 0
 
@@ -132,7 +132,7 @@ SHOW INDEX FROM test;
 | test  | 1          | TIME INDEX | 1            | time        | A         |             |          |        | NO   |            |         |               | YES     |            |
 +-------+------------+------------+--------------+-------------+-----------+-------------+----------+--------+------+------------+---------+---------------+---------+------------+
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'true');
 
 Affected Rows: 0
 
@@ -162,11 +162,11 @@ SHOW INDEX FROM test;
 | test  | 1          | TIME INDEX     | 1            | time        | A         |             |          |        | NO   |                            |         |               | YES     |            |
 +-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+----------------------------+---------+---------------+---------+------------+
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'false');
 
 Error: 1004(InvalidArguments), Invalid column option, column name: message, error: FULLTEXT index already enabled
 
-ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT;
+ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT INDEX;
 
 Affected Rows: 0
 
@@ -195,19 +195,19 @@ SHOW INDEX FROM test;
 | test  | 1          | TIME INDEX | 1            | time        | A         |             |          |        | NO   |            |         |               | YES     |            |
 +-------+------------+------------+--------------+-------------+-----------+-------------+----------+--------+------+------------+---------+---------------+---------+------------+
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinglish', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinglish', case_sensitive = 'false');
 
 Error: 1002(Unexpected), Invalid fulltext option: Chinglish, expected: 'English' | 'Chinese'
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'no');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'no');
 
 Error: 1002(Unexpected), Invalid fulltext option: no, expected: 'true' | 'false'
 
-ALTER TABLE test MODIFY COLUMN time SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN time SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'false');
 
 Error: 1004(InvalidArguments), Invalid column option, column name: time, error: FULLTEXT index only supports string type
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'English', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'English', case_sensitive = 'true');
 
 Error: 1004(InvalidArguments), Invalid column option, column name: message, error: Cannot change analyzer or case_sensitive if FULLTEXT index is set before. Previous analyzer: Chinese, previous case_sensitive: true
 
diff --git a/tests/cases/standalone/common/alter/change_col_fulltext_options.sql b/tests/cases/standalone/common/alter/change_col_fulltext_options.sql
index 06bd601b4f81..b5ead6e6104a 100644
--- a/tests/cases/standalone/common/alter/change_col_fulltext_options.sql
+++ b/tests/cases/standalone/common/alter/change_col_fulltext_options.sql
@@ -15,7 +15,7 @@ INSERT INTO test VALUES ('hello', '2020-01-01 00:00:00'),
 
 SELECT * FROM test WHERE MATCHES(message, 'hello') ORDER BY message;
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'true');
 
 SELECT * FROM test WHERE MATCHES(message, 'hello') ORDER BY message;
 
@@ -31,32 +31,32 @@ SHOW CREATE TABLE test;
 
 SHOW INDEX FROM test;
 
-ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT;
+ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT INDEX;
 
 SHOW CREATE TABLE test;
 
 SHOW INDEX FROM test;
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'true');
 
 SHOW CREATE TABLE test;
 
 SHOW INDEX FROM test;
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'false');
 
-ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT;
+ALTER TABLE test MODIFY COLUMN message UNSET FULLTEXT INDEX;
 
 SHOW CREATE TABLE test;
 
 SHOW INDEX FROM test;
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinglish', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinglish', case_sensitive = 'false');
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'no');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'no');
 
-ALTER TABLE test MODIFY COLUMN time SET FULLTEXT WITH(analyzer = 'Chinese', case_sensitive = 'false');
+ALTER TABLE test MODIFY COLUMN time SET FULLTEXT INDEX WITH(analyzer = 'Chinese', case_sensitive = 'false');
 
-ALTER TABLE test MODIFY COLUMN message SET FULLTEXT WITH(analyzer = 'English', case_sensitive = 'true');
+ALTER TABLE test MODIFY COLUMN message SET FULLTEXT INDEX WITH(analyzer = 'English', case_sensitive = 'true');
 
 DROP TABLE test;
diff --git a/tests/cases/standalone/common/alter/change_col_skipping_options.result b/tests/cases/standalone/common/alter/change_col_skipping_options.result
new file mode 100644
index 000000000000..4b6b7705ee3a
--- /dev/null
+++ b/tests/cases/standalone/common/alter/change_col_skipping_options.result
@@ -0,0 +1,263 @@
+ -- Test basic skipping index operations on a single column
+CREATE TABLE `test` (
+  `value` DOUBLE,
+  `category` STRING,
+  `metric` INT64,
+  `time` TIMESTAMP TIME INDEX,
+);
+
+Affected Rows: 0
+
+SHOW CREATE TABLE test;
+
++-------+-------------------------------------+
+| Table | Create Table                        |
++-------+-------------------------------------+
+| test  | CREATE TABLE IF NOT EXISTS "test" ( |
+|       |   "value" DOUBLE NULL,              |
+|       |   "category" STRING NULL,           |
+|       |   "metric" BIGINT NULL,             |
+|       |   "time" TIMESTAMP(3) NOT NULL,     |
+|       |   TIME INDEX ("time")               |
+|       | )                                   |
+|       |                                     |
+|       | ENGINE=mito                         |
+|       |                                     |
++-------+-------------------------------------+
+
+-- Write initial data
+INSERT INTO test VALUES 
+(1.0, 'A', 100, '2020-01-01 00:00:00'),
+(2.0, 'B', 200, '2020-01-01 00:00:01'),
+(3.0, 'A', 300, '2020-01-02 00:00:00'),
+(4.0, 'B', 400, '2020-01-02 00:00:01');
+
+Affected Rows: 4
+
+-- Test queries before adding skipping index
+SELECT * FROM test WHERE value > 2.0 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 3.0   | A        | 300    | 2020-01-02T00:00:00 |
+| 4.0   | B        | 400    | 2020-01-02T00:00:01 |
++-------+----------+--------+---------------------+
+
+SELECT * FROM test WHERE metric > 200 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 3.0   | A        | 300    | 2020-01-02T00:00:00 |
+| 4.0   | B        | 400    | 2020-01-02T00:00:01 |
++-------+----------+--------+---------------------+
+
+-- Add skipping index
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+Affected Rows: 0
+
+-- Test queries after adding skipping index
+SELECT * FROM test WHERE value > 2.0 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 3.0   | A        | 300    | 2020-01-02T00:00:00 |
+| 4.0   | B        | 400    | 2020-01-02T00:00:01 |
++-------+----------+--------+---------------------+
+
+SELECT * FROM test WHERE value BETWEEN 2.0 AND 4.0 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 2.0   | B        | 200    | 2020-01-01T00:00:01 |
+| 3.0   | A        | 300    | 2020-01-02T00:00:00 |
+| 4.0   | B        | 400    | 2020-01-02T00:00:01 |
++-------+----------+--------+---------------------+
+
+-- Add more data to test dynamic updates
+INSERT INTO test VALUES 
+(5.0, 'C', 500, '2020-01-03 00:00:00'),
+(6.0, 'A', 600, '2020-01-03 00:00:01'),
+(7.0, 'B', 700, '2020-01-04 00:00:00'),
+(8.0, 'C', 800, '2020-01-04 00:00:01');
+
+Affected Rows: 4
+
+-- Test queries with new data
+SELECT * FROM test WHERE value > 6.0 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 7.0   | B        | 700    | 2020-01-04T00:00:00 |
+| 8.0   | C        | 800    | 2020-01-04T00:00:01 |
++-------+----------+--------+---------------------+
+
+SELECT * FROM test WHERE value < 3.0 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 1.0   | A        | 100    | 2020-01-01T00:00:00 |
+| 2.0   | B        | 200    | 2020-01-01T00:00:01 |
++-------+----------+--------+---------------------+
+
+-- Test multiple columns with skipping indexes
+ALTER TABLE test MODIFY COLUMN metric SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+Affected Rows: 0
+
+-- Test queries with multiple skipping indexes
+SELECT * FROM test WHERE value > 5.0 AND metric < 700 ORDER BY time;
+
++-------+----------+--------+---------------------+
+| value | category | metric | time                |
++-------+----------+--------+---------------------+
+| 6.0   | A        | 600    | 2020-01-03T00:00:01 |
++-------+----------+--------+---------------------+
+
+-- SQLNESS ARG restart=true
+-- Verify persistence after restart
+SHOW CREATE TABLE test;
+
++-------+-----------------------------------------------------------------------------------+
+| Table | Create Table                                                                      |
++-------+-----------------------------------------------------------------------------------+
+| test  | CREATE TABLE IF NOT EXISTS "test" (                                               |
+|       |   "value" DOUBLE NULL SKIPPING INDEX WITH(granularity = '1024', type = 'BLOOM'),  |
+|       |   "category" STRING NULL,                                                         |
+|       |   "metric" BIGINT NULL SKIPPING INDEX WITH(granularity = '1024', type = 'BLOOM'), |
+|       |   "time" TIMESTAMP(3) NOT NULL,                                                   |
+|       |   TIME INDEX ("time")                                                             |
+|       | )                                                                                 |
+|       |                                                                                   |
+|       | ENGINE=mito                                                                       |
+|       |                                                                                   |
++-------+-----------------------------------------------------------------------------------+
+
+SHOW INDEX FROM test;
+
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| Table | Non_unique | Key_name       | Seq_in_index | Column_name | Collation | Cardinality | Sub_part | Packed | Null | Index_type               | Comment | Index_comment | Visible | Expression |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| test  | 1          | SKIPPING INDEX | 3            | metric      | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
+| test  | 1          | TIME INDEX     | 1            | time        | A         |             |          |        | NO   |                          |         |               | YES     |            |
+| test  | 1          | SKIPPING INDEX | 1            | value       | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+
+-- Test modifying existing skipping index options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 8192, type = 'BLOOM');
+
+Affected Rows: 0
+
+SHOW CREATE TABLE test;
+
++-------+-----------------------------------------------------------------------------------+
+| Table | Create Table                                                                      |
++-------+-----------------------------------------------------------------------------------+
+| test  | CREATE TABLE IF NOT EXISTS "test" (                                               |
+|       |   "value" DOUBLE NULL SKIPPING INDEX WITH(granularity = '8192', type = 'BLOOM'),  |
+|       |   "category" STRING NULL,                                                         |
+|       |   "metric" BIGINT NULL SKIPPING INDEX WITH(granularity = '1024', type = 'BLOOM'), |
+|       |   "time" TIMESTAMP(3) NOT NULL,                                                   |
+|       |   TIME INDEX ("time")                                                             |
+|       | )                                                                                 |
+|       |                                                                                   |
+|       | ENGINE=mito                                                                       |
+|       |                                                                                   |
++-------+-----------------------------------------------------------------------------------+
+
+-- Test removing skipping index
+ALTER TABLE test MODIFY COLUMN value UNSET SKIPPING INDEX;
+
+Affected Rows: 0
+
+SHOW INDEX FROM test;
+
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| Table | Non_unique | Key_name       | Seq_in_index | Column_name | Collation | Cardinality | Sub_part | Packed | Null | Index_type               | Comment | Index_comment | Visible | Expression |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| test  | 1          | SKIPPING INDEX | 3            | metric      | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
+| test  | 1          | TIME INDEX     | 1            | time        | A         |             |          |        | NO   |                          |         |               | YES     |            |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+
+-- Test adding back with different options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 2048, type = 'BLOOM');
+
+Affected Rows: 0
+
+SHOW CREATE TABLE test;
+
++-------+-----------------------------------------------------------------------------------+
+| Table | Create Table                                                                      |
++-------+-----------------------------------------------------------------------------------+
+| test  | CREATE TABLE IF NOT EXISTS "test" (                                               |
+|       |   "value" DOUBLE NULL SKIPPING INDEX WITH(granularity = '2048', type = 'BLOOM'),  |
+|       |   "category" STRING NULL,                                                         |
+|       |   "metric" BIGINT NULL SKIPPING INDEX WITH(granularity = '1024', type = 'BLOOM'), |
+|       |   "time" TIMESTAMP(3) NOT NULL,                                                   |
+|       |   TIME INDEX ("time")                                                             |
+|       | )                                                                                 |
+|       |                                                                                   |
+|       | ENGINE=mito                                                                       |
+|       |                                                                                   |
++-------+-----------------------------------------------------------------------------------+
+
+-- Test removing all skipping indexes
+ALTER TABLE test MODIFY COLUMN value UNSET SKIPPING INDEX;
+
+Affected Rows: 0
+
+ALTER TABLE test MODIFY COLUMN metric UNSET SKIPPING INDEX;
+
+Affected Rows: 0
+
+SHOW INDEX FROM test;
+
++-------+------------+------------+--------------+-------------+-----------+-------------+----------+--------+------+------------+---------+---------------+---------+------------+
+| Table | Non_unique | Key_name   | Seq_in_index | Column_name | Collation | Cardinality | Sub_part | Packed | Null | Index_type | Comment | Index_comment | Visible | Expression |
++-------+------------+------------+--------------+-------------+-----------+-------------+----------+--------+------+------------+---------+---------------+---------+------------+
+| test  | 1          | TIME INDEX | 1            | time        | A         |             |          |        | NO   |            |         |               | YES     |            |
++-------+------------+------------+--------------+-------------+-----------+-------------+----------+--------+------+------------+---------+---------------+---------+------------+
+
+-- Test invalid operations and error cases
+-- Try to set skipping index on string column (should fail)
+ALTER TABLE test MODIFY COLUMN category SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+Affected Rows: 0
+
+-- Try to set skipping index on timestamp column (should fail)
+ALTER TABLE test MODIFY COLUMN time SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+Affected Rows: 0
+
+-- Test invalid option values
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(blabla = 1024, type = 'BLOOM');
+
+Error: 1004(InvalidArguments), Invalid column option, column name: value, error: invalid SKIPPING INDEX option: blabla
+
+-- Test partial options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 4096);
+
+Affected Rows: 0
+
+SHOW INDEX FROM test;
+
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| Table | Non_unique | Key_name       | Seq_in_index | Column_name | Collation | Cardinality | Sub_part | Packed | Null | Index_type               | Comment | Index_comment | Visible | Expression |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+| test  | 1          | SKIPPING INDEX | 2            | category    | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
+| test  | 1          | TIME INDEX     | 1            | time        | A         |             |          |        | NO   |                          |         |               | YES     |            |
+| test  | 1          | SKIPPING INDEX | 4            | time        | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
+| test  | 1          | SKIPPING INDEX | 1            | value       | A         |             |          |        | YES  | greptime-bloom-filter-v1 |         |               | YES     |            |
++-------+------------+----------------+--------------+-------------+-----------+-------------+----------+--------+------+--------------------------+---------+---------------+---------+------------+
+
+-- Clean up
+DROP TABLE test;
+
+Affected Rows: 0
+
diff --git a/tests/cases/standalone/common/alter/change_col_skipping_options.sql b/tests/cases/standalone/common/alter/change_col_skipping_options.sql
new file mode 100644
index 000000000000..905a61598381
--- /dev/null
+++ b/tests/cases/standalone/common/alter/change_col_skipping_options.sql
@@ -0,0 +1,83 @@
+ -- Test basic skipping index operations on a single column
+CREATE TABLE `test` (
+  `value` DOUBLE,
+  `category` STRING,
+  `metric` INT64,
+  `time` TIMESTAMP TIME INDEX,
+);
+
+SHOW CREATE TABLE test;
+
+-- Write initial data
+INSERT INTO test VALUES 
+(1.0, 'A', 100, '2020-01-01 00:00:00'),
+(2.0, 'B', 200, '2020-01-01 00:00:01'),
+(3.0, 'A', 300, '2020-01-02 00:00:00'),
+(4.0, 'B', 400, '2020-01-02 00:00:01');
+
+-- Test queries before adding skipping index
+SELECT * FROM test WHERE value > 2.0 ORDER BY time;
+SELECT * FROM test WHERE metric > 200 ORDER BY time;
+
+-- Add skipping index
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+-- Test queries after adding skipping index
+SELECT * FROM test WHERE value > 2.0 ORDER BY time;
+SELECT * FROM test WHERE value BETWEEN 2.0 AND 4.0 ORDER BY time;
+
+-- Add more data to test dynamic updates
+INSERT INTO test VALUES 
+(5.0, 'C', 500, '2020-01-03 00:00:00'),
+(6.0, 'A', 600, '2020-01-03 00:00:01'),
+(7.0, 'B', 700, '2020-01-04 00:00:00'),
+(8.0, 'C', 800, '2020-01-04 00:00:01');
+
+-- Test queries with new data
+SELECT * FROM test WHERE value > 6.0 ORDER BY time;
+SELECT * FROM test WHERE value < 3.0 ORDER BY time;
+
+-- Test multiple columns with skipping indexes
+ALTER TABLE test MODIFY COLUMN metric SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+-- Test queries with multiple skipping indexes
+SELECT * FROM test WHERE value > 5.0 AND metric < 700 ORDER BY time;
+
+-- SQLNESS ARG restart=true
+-- Verify persistence after restart
+SHOW CREATE TABLE test;
+SHOW INDEX FROM test;
+
+-- Test modifying existing skipping index options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 8192, type = 'BLOOM');
+SHOW CREATE TABLE test;
+
+-- Test removing skipping index
+ALTER TABLE test MODIFY COLUMN value UNSET SKIPPING INDEX;
+SHOW INDEX FROM test;
+
+-- Test adding back with different options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 2048, type = 'BLOOM');
+SHOW CREATE TABLE test;
+
+-- Test removing all skipping indexes
+ALTER TABLE test MODIFY COLUMN value UNSET SKIPPING INDEX;
+ALTER TABLE test MODIFY COLUMN metric UNSET SKIPPING INDEX;
+SHOW INDEX FROM test;
+
+-- Test invalid operations and error cases
+-- Try to set skipping index on string column (should fail)
+ALTER TABLE test MODIFY COLUMN category SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+-- Try to set skipping index on timestamp column (should fail)
+ALTER TABLE test MODIFY COLUMN time SET SKIPPING INDEX WITH(granularity = 1024, type = 'BLOOM');
+
+-- Test invalid option values
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(blabla = 1024, type = 'BLOOM');
+
+-- Test partial options
+ALTER TABLE test MODIFY COLUMN value SET SKIPPING INDEX WITH(granularity = 4096);
+SHOW INDEX FROM test;
+
+-- Clean up
+DROP TABLE test;